rs213788218 SNP Detail

Summary

• ID
  rs213788218
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:118054847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gagagaggg agagggagag ggagagggag
  agggagagag agaCTTGTAA TGTGTTCATT GTGGAACCCA GGAGGTGGGC ACGTCCCCTG
  GTCTCACAAC AGTAGCGTTG TTAATTATCt tttttgtggt gctgtgatca aagtcaaagt
  Y
  agaacttcac tcgtgctaag gaagtgttct accaatgagc ggtacccaca gcTATTTTAC
  TTTTTGGtgt ctgtctgtgt gtatacgatc ttgtgatttc tgtgtgtgtg tgtgtgtgtg
  tgtgtgtgtg tgtgtgtagg ccagaggtca                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322840375	CHEV_8_119852008	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213788218					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:118054847 () rs orientation: forward

Symbol	Name	Function Class
Cmip	c-Maf inducing protein	within coordinates
Tssr79599	transcription start site region 79599	766 bp upstream