rs213791649 SNP Detail

Summary

• ID
  rs213791649
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:96862703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGGTTCA CAACACTGGC
  TGCTCTTCTA GAGGACCTAG GTTCAATTCT AAGCATCCAC ATGGTAGTTG CCAACCATCC
  ATAACTCCAG ACCTATGGCC TCCAATGCCC ATTGCCCTTT TCTGGCCTCT AAAGGCACCA
  CATACACAAC ACACACACAC ACACACACAC ACTCCTACAC TTAAACACAT AAATAAAATT
  W
  TAAAAAAAAA TATATATATA TACCCTGATT TCATATATTT TATTTTAACC TTTTCCAAAA
  TTGTTGTATC TATTTTCATC CTTTTTTCTT TCCATATGCA TTGTAGAATA AGCTTATGTA
  CACCAACGAA ACTTTTTGCA TGAATTTTTA TAAGTATTGT GGTAAACCTA TACATAAATT
  TTGGAAAATG TACTGGGTTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	JF1/MsJ	MOLF/EiJ	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
ss372442866	MGP_WTSI_7_104362006	EVA_MGPV3	EVA_MGPV3	f	SNP	T	A	T	T	T	T	T	T	T	T	A	T	A	A	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	JF1/MsJ	MOLF/EiJ	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
rs213791649					SNP	T	A	T	T	T	T	T	T	T	T	A	T	A	A	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss372442866	MGP_WTSI_7_104362006	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:96862703 () rs orientation: forward

Symbol	Name	Function Class
Gab2	growth factor receptor bound protein 2-associated protein 2	within coordinates
Tssr67959	transcription start site region 67959	1983 bp downstream