rs213801816 SNP Detail

Summary

• ID
  rs213801816
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68505466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAAATGGG ACTAAAGATA
  AACTTCTGCT TCTCTATCAT CATGGACATA TCTAGAAAGC ATTAGCCTGA AACCCAGCAG
  AAAGATCTCT AAAGAATCTG AAAATTCTGC CTACCTAGTT TCAGACTTTG AGCATCCAGA
  CTAGAAAACA TAAACCTGTG TTACATACAG ATCCCACAGT CTATGGCACC ACTTAACACA
  W
  GTCTGAACTA ACACCATTCT AAATCTGATG CCTACCGTGA CCTGTCTCGT TAGGCCAGTA
  AGAAAAGTGA AATGATTTCT CACAAAGTTA CTGTGCAGAA AATTAGAGAC TCATAATTCC
  TTTATTCATT ATTAATAAAG AATTTAATTA AGAAATAATT TATTAATTTA GCAAATATGT
  ATGAACATCC TTGGTAGGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321154717	CHEV_4_68248263	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213801816					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68505466 () rs orientation: forward

Symbol	Name	Function Class
Tssr37618	transcription start site region 37618	676 bp upstream