rs213824405 SNP Detail

Summary

• ID
  rs213824405
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:98621074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtggcctaa gcttcgagca gatgtggatc
  tccatcctta AACCAACAAA CACTATCATG TTAGCTACAA CATTTTCCAA GCTTTCATCT
  TGATGTCATA TTTTATACTT TCTTGAGGTG TTTTATGGTT TAAAATGCAC GATAGAAACT
  M
  TTTAAATGTC TTACACTGAT TCACTATTTA CTAGTGATCT GAACTGACGA TCACTGACCA
  CGACTAAGTT CGGAGGTTAT CAGATGGACA TGGCTCCCTG tttttttttt ttgttttttg
  ttttttggtt tttttttttt GTGCTATCtc                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319867644	CHEV_1_100589926	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213824405					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:98621074 () rs orientation: forward

Symbol	Name	Function Class
Tssr8238	transcription start site region 8238	127 bp upstream