rs213906657 SNP Detail

Summary

• ID
  rs213906657
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107650744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGAGGCAC TGACAGGAGA
  ACTAGATGAC CTGGGGCTGG AAAGGTGGCT CAGTGGGTGA GAACATGTAC TGACCACACT
  AGCAAACAAC CTGAATTCAA TTTCTGGCAC AAATGTCAGG CAGCTCAGGA CTGCCTGTAA
  CTCCAGTTCC AGTGGATCCA ATGCCCTCTT CTGCCTTCCA AGGCCATGTG CACTCTCATG
  S
  GCGCGCGCAC ACACACACAC ACACACACAC ACACACACAC ACTACAATAA ATCTTTATAA
  GAAATCCAGG AAGTCCTGTA ACTTAATCAT AGCAACTACA ACACTACCCC CTCTTGATTT
  AAAATTAGGC AAAGGGCTTG AATAGACATT TGTCCAACAA GATAAACAAA TGGGCAATAA
  AGCATATGAA AATATGCTCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321251339	CHEV_4_107466152	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213906657					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107650744 () rs orientation: forward

Symbol	Name	Function Class
Gm69341	predicted gene, 69341	within coordinates
Lrp8os3	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3	within coordinates