rs213993537 SNP Detail

Summary

• ID
  rs213993537
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130299785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAATAGTTG ACAAACATTC CAAAGGTGAA
  ACAATAAATA TAATAAGACT ACCTTAGGTA ATATATGTTG TAATGAGGCA AAAATCATAA
  GACAGTAATA AAGATAAAAT GAAGGATAAA TGATAATCTA CGCATATTGG CATTGGAAAT
  G
  TGACTGTAAA ATGGGGACGG GGTTGCCTCC CCATCTGGTG GAGGTCCACG GGCCCAGCCT
  GGGCTGCAGC AGTGTTCACA GCTACTCAGA GAGATTCCAG ATCCTCTAAA GGATTGTTTT
  CCATTGTTTT CAAGCTACAA TTTTCTCCTC                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319971986	CHEV_1_132268625	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213993537					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130299785 () rs orientation: forward

Symbol	Name	Function Class
Rr417908	regulatory region 417908	173 bp proximal
Rr417909	regulatory region 417909	280 bp proximal
Rr417910	regulatory region 417910	1729 bp proximal