rs214036762 SNP Detail

Summary

• ID
  rs214036762
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45236531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGAGTTCTTT TTTTGGGAGG
  TTGTGATCAC TGACAAATCT GGGGTTTGAG AGACCTGAGT TCTGGTCCCC TGGTTCTGCC
  TTAGTTCCTA GGGACTTGGA GAAGAAGGCT CCTCCCTTCC TGAGGCCCCA TCTGTTGTCA
  GGGTGAAGTC GTATCCATAT GGGAGAGTCT CATCTCCACA GTTGCCTTCC AAGGATGCAG
  R
  GGAGGAAATG AGTTAGAGCT GTAGTAGGTT AGACATCAGG AAGCTCTTCC AACTGGGTGG
  AGTGGCCAGC TATGAAATGC ATAAAGAGGG AGGCATTGAG CTCTGGCATC CTCATGGTCT
  TTGAAGATCC GGATGCTTCC TAATGTCCTG TGAAGCCTGG GTCAAAGTTC AGGGTCAAAG
  TTCAGTGGCT GCTGTCCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322943017	CHEV_9_45133316	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214036762					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45236531 () rs orientation: forward

Symbol	Name	Function Class
Rr203899	regulatory region 203899	352 bp distal
Rr203900	regulatory region 203900	362 bp proximal
Rr203901	regulatory region 203901	1190 bp proximal
Tmprss13	transmembrane protease, serine 13	within coordinates