rs214068676 SNP Detail

Summary

• ID
  rs214068676
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:139336522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGCTACA AGCAAAGGAT
  CCCATTGCAA AGAAGGTTCA AGGTGAGAAC TGATACCAGA CGTCATCCTC TGACCTCTAC
  ACACGGGCTG TGGTATGTGT GTGTTTGTAC TCACACACAT GAACCTGCAC ATATGGGGAC
  ACACACACAC ACACACACAC ACACACACAC ACACACACAC ACACACAGAC CTTTTCAACT
  S
  TTCATGGTGC ATACTAGTAA TCTAAGCCCT AGGGAAGGAG AGGCTGGAGG AGCAGGAGTT
  CAAAGCCAGC ATGAGCTACA CAAGACCCTG TATCAAGACC ACCACCACCA TAACAACAAA
  CAGCAAAATT CCTTCCCCAA AATAACTCCC AAGGTAGCTG AGTGGTGTTG CCTGCGATCC
  CAGCCCTGGG AGGCAGAAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321704282	CHEV_5_139826721	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214068676					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:139336522 () rs orientation: forward

Symbol	Name	Function Class
Cyp2w1	cytochrome P450, family 2, subfamily w, polypeptide 1	1850 bp upstream
Tssr49499	transcription start site region 49499	1840 bp upstream