rs214111983 SNP Detail

Summary

• ID
  rs214111983
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84354100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAAAATC AAAATTAAAG
  AAGAAAAGGC ATTTTTCATG TTCTTTCCTG GGAGGAGCTT AGACAAATGG CCAATGACCA
  GAAGTCAATG TCGGAAGTCA TAAGACCACA CATGGTCATA AGACCACACA TGGCCCACCC
  AGCAGCACAA TTGGAATTTA CCAACTGGTA GACTATTGAC CACATGAGTA CAAGAAAAGA
  A
  GGAAACATCT TAACTTGAGG ATCAGGAGCA ACACAGCAGA GATCTTAACT GATAAGGGAA
  GTACCTTTTG ATGGTTAATA TTGATTGTCA AGTTGACAGA GTCCAGAATC ACCTAGAAGA
  CAGACCTCTG GACCAAAAAG GATAGTCTTG CTTAAATTTG TTGAAGTGGG ACGCCCCACC
  TTCAAAGTGG CTGACATCAT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260799	CHEV_16_84557457	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214111983					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84354100 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1070 bp upstream
Rr518505	regulatory region 518505	1041 bp proximal
Rr518506	regulatory region 518506	1142 bp proximal
Tssr139145	transcription start site region 139145	44 bp downstream