rs214131317 SNP Detail

Summary

• ID
  rs214131317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:164724848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAAGGCTT CACGGGCCAA
  TGACTCTTTC TTCTATTTGC TCTCCAGCTG CTGATTCACG GAGTCCCCTG GGTCCCTGTC
  AACTGCAGTG CTGACCAGCC TACCCACCTG TGCTACGCCT TCCTGTGGGC CTCCCCCCTC
  TTCTGTGGGA CCCCGTGACG TGGGTTCAGT CCAGCCAGAG AAGAAAACTC TGATGCTAGC
  R
  TCGCAGCCCC CAGAGGGTGA GAGAAAAGGG GGACCTTATG CAGCCTTGAA ACCCGTGGGC
  TCAGCCCCTC AAGAAGCCAT TCCAAACCCT TCTGTAATCA AGGCCCTTGT GTCACGTGTC
  CTGCTGCCCC TGTGATTTTT ATCTGCCAAA CTGTACAGAT AAAGTAACTA TTTGATTTTT
  TTCACCAAAT TACCAGGCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320607041	CHEV_2_164708428	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214131317					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164724848 () rs orientation: forward

Symbol	Name	Function Class
4930445K14Rik	RIKEN cDNA 4930445K14 gene	within coordinates
Pcif1	phosphorylated CTD interacting factor 1	mRNA-UTR
Rr569755	regulatory region 569755	within coordinates