rs214132448 SNP Detail

Summary

• ID
  rs214132448
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117430325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCATGGA CGTGCAGGCG
  CAGAGGCCAC CTTTGTTGGA AGTGAAGAGG AATGTAGAGC TGAAGACAAG CCTGGTCAAG
  TTCTCCTCCC GAGTGCCCCG TCAGCAAGCA GGCTCAAGAG AGGTCCTGAC CAGATGGAGG
  ATGCCTTGGA GCCCGTAAAG AAACGGACAC GAGGCATGGG TGCAGTGACC AAAGTTGACA
  Y
  ATCCCGTCCC AGAGGACCAC TCTTCAGCAC AGTGTCACAG ACCCAGGGCC ACACTGCAGC
  TCAGAAAGGC CCTAAGAAGG CAGGACCTCG TGGGTGCTCT ACTGTTGGTA CAGTGCTGAG
  GAACCAGAAG CCAGCTCCCA CTGTTCCTGC CCAGAAGCCT GGCACATCCA CTGCTCCTGT
  AGTGGTAAGG AAGAGACCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323497995	CHEV_10_117031476	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214132448					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117430325 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2233	CpG island 2233	102 bp distal
Gm63651	predicted gene, 63651	306 bp upstream
Kifc5c-ps	kinesin family member C5C, pseudogene	within coordinates
Rr402265	regulatory region 402265	1401 bp upstream
Rr439564	regulatory region 439564	1264 bp proximal