rs214174686 SNP Detail

Summary

• ID
  rs214174686
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97147810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGTCTGC TGGTTCTTGT
  TGCTTACACT TCATAAAGCT TGTCTTGAAG GCAGGGGACC CTGACAAATG TTAGAGTCCT
  GGATCCAGCC ATGCCTGAAA GCCACCAAAT GCTTTTATTT AACTGTATTC TCTACTGATC
  TTTGTTTTGG GTACACTGTT CTGCGTTGTG CCTTTGTCCC TTGTGACTGA CCTAGTCCTG
  R
  TGCCCTCAGT GGAGGTGTGA GTTGTCTATG TGTTCTTATG TGCCAGACCA AGCTAGCCTG
  CATACGGTAG CTCATTCATT GTTCACCGAA CCCTACAGTG ATACTGTCCC ATAACCCAGA
  CGATCAACAG CCGCACTCCA AATTGTTTGA AAGTGGAATG TGTTGAAATG GACTTGAGGC
  TCTCCTCGAA GAGTTTTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076417	CHEV_15_97080360	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214174686					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97147810 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7616	CpG island 7616	1870 bp distal
Gm57814	predicted gene, 57814	767 bp upstream
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr305670	regulatory region 305670	410 bp distal
Rr308785	regulatory region 308785	10 bp distal
Rr308786	regulatory region 308786	1591 bp proximal
Rr312356	regulatory region 312356	1009 bp distal