rs214241257 SNP Detail

Summary

• ID
  rs214241257
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:59905073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTGGAATG GGTCCTCTCA CCTCTAGTCT
  CTCCTGAGTT TCCTTAAATG GTAGTTCATT CACTAGGTAT ATGCACTGTA GGCTTTATTT
  TATCGAGCCT TAACCTCTCC ATATCTTAGC TTTTCATGGT TGTACAACAC CACCttcttt
  Y
  tttctttctt tttttttttt tttCTtttgg tttttttgag acagggtttc tctgtgtagt
  cctggctgtc ctggaactca ctttgtagac caggctggcc tcgaactcag aaatccgcct
  gcctctgcct cccaagtgct gggattaaag                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319739738	CHEV_1_59922758	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214241257					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:59905073 () rs orientation: forward

Symbol	Name	Function Class
Bmpr2	bone morphogenetic protein receptor type 2	within coordinates
Tssr6906	transcription start site region 6906	1431 bp upstream