rs214263528 SNP Detail

Summary

• ID
  rs214263528
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122870561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACAGATG TACTCACAGC
  TAACATGTAT CCCCTGCTCT GCAGACATCC GATATGGACT CCCCTAAGAT TGTACTTCTC
  AAGGATAGTG GTCCATCTCA GTGGGCTTTG TTCTCAGGCA AACAGGGGGC TGAGCATCTT
  ATCCAAGCCA TGTTCCTAGT GTAGTTTTGG GGAGTGGGTA CTTCGTATGT AGTCTCTAGA
  Y
  GGATATGATA GAGAGGTGGT GGCTGGATGT GGCTCTCTGG CAGGTGAGCT GGGTGGATGA
  ATAATTGGTG AATGGGTAGG TGTGCGAGCT GATAAGTGGG TAGATGGGTA TATGGTGGAC
  AGTGAGTTGA CAGACAGGTG AGAATAACAG TCACCTGTAC TGGCTAGTTT TGTGTCAACT
  TGACACAGCT GGGGTTATCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322848682	CHEV_8_124667722	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214263528					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122870561 () rs orientation: forward

Symbol	Name	Function Class
Gm39268	predicted gene, 39268	1940 bp downstream
Gm56875	predicted gene, 56875	within coordinates
Rr174877	regulatory region 174877	161 bp distal
Rr188324	regulatory region 188324	641 bp proximal