rs214307636 SNP Detail

Summary

• ID
  rs214307636
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34098770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACAGTTTC AATAAAGACT
  ATATGACCCA TACATCCTAA AATATTTTCT GTCTAGTTCT GTAGAGAAAA ACCAGGTCAA
  GTTTGCTTCC CAGTACTTGG GAGGGGTGGG GGGGGACAGA GTCAGGTGAA TCTGAGTTCT
  AGACCAGCCA GAGCTGAACA GAGAAAATCC GTCTCAAAAC AAACAAAAAG GTTTGCTGAG
  R
  TTCTGGACAA TGCGGTTACT GGTTAAGATC ATGTACCACT GCAGAGGACC TGAATTTGTT
  TTCCACACTG AGTGACTTGC AACCACCTAT AATTAAGCTC CAGAAGATCT CACAGCCTCT
  TCTGGCCTCC ACACTAACAT GCACAAAATC ACACACATGT ACACATAATT TAAACAAACC
  AACAAAAAAC CCAACTTAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324918813	CHEV_15_34028379	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214307636					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34098770 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	within coordinates
Rr500667	regulatory region 500667	1405 bp distal
Tssr131017	transcription start site region 131017	884 bp upstream
Tssr133963	transcription start site region 133963	892 bp downstream