rs214315819 SNP Detail

Summary

• ID
  rs214315819
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30731495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACTGAAA CTTCTGTTCG
  TACTGGGAAG GCATGCGGTT CAGTTGCACA CCCCACCCAA GAGCTTCTCT TCTTTCTTGT
  GACGTATTTT CCCCTTATTT CCACGTGCTT TGTGGCTTGA TGAAATGATT TTGTAATCCC
  CAGTTCACTC TGACCTGAAG TTCTTGCAAC TGCATTATGC AACCCCCTCC CCCCCGCCCC
  S
  CTGCCTGGGA CCTGGTCTCT TGTCTGTGCT GTGACCCTGC CCATAATCTT GGAGAAGACA
  CTTATCCTTC CCCACAGCAC CCTGAGCCTG AAAAGGCCTG CATAGCTGCA CTAGGTTGCT
  CCCTCCCAAT AAGGAGGAGT CCAAGGAACT CCAGGAATTG CCTGCTAGAG CCCATCCCTC
  CTCCCAGGCC CTCTCTGCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322138559	CHEV_7_31817089	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214315819					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30731495 () rs orientation: forward

Symbol	Name	Function Class
Fxyd5	FXYD domain-containing ion transport regulator 5	658 bp downstream
Rr644976	regulatory region 644976	1132 bp distal
Rr644977	regulatory region 644977	within coordinates
Rr644978	regulatory region 644978	1423 bp proximal
Tssr65829	transcription start site region 65829	783 bp upstream