rs214360662 SNP Detail

Summary

• ID
  rs214360662
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10991830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACTGGAA CAGCATCTTT
  GGGTCATTCT TTTGAGTGCT AGAGGCAACC TTATCCTCAT TTACAGGTCT GACTTAGATC
  CGTTTCTATT GGCACTCTCA AACTGGTCCA CTGCAATGGC TCTCCAGTTA GGAAGAGTCA
  AGAATCGGGC AACAAATGGA GAACCCCATT AGCATTCCCC AGATACTCCT TCATTGCGCA
  Y
  GAGGCAATGG TTTCCCTCTC TTGCATTTTT ACAACAAAAC AAACAAAATA AGGAATAAGA
  CACAGCATCT TTCACTATTC TATATTTTAC TAGCACAACC AAAGCTATGT GTTGCCCACA
  ACATCGTATA GACTCAGTAC AGCCACGGAG GCTTCCTCTA AGACAAAAGG GGACACTTTC
  AGGGTAGAGT CTCTGGCTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324260887	CHEV_13_10941040	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214360662					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:10991830 () rs orientation: forward

Symbol	Name	Function Class
Rr270346	regulatory region 270346	171 bp proximal
Rr278201	regulatory region 278201	246 bp proximal