rs214362513 SNP Detail

Summary

• ID
  rs214362513
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31895487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCATC ACAACCATTA CAGATGTGAG
  Y
  CACCATGTGG TTGCTGGGAA TTGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325359831	CHEV_17_31813458	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214362513					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31895487 () rs orientation: forward

Symbol	Name	Function Class
Cryaa	crystallin, alpha A	1418 bp upstream
Gm50222	predicted gene, 50222	276 bp downstream
Tssr143680	transcription start site region 143680	1411 bp upstream
Tssr147305	transcription start site region 147305	1596 bp downstream
Tssr147306	transcription start site region 147306	1618 bp downstream
Tssr147307	transcription start site region 147307	1668 bp downstream
Tssr147308	transcription start site region 147308	1985 bp downstream