rs214385788 SNP Detail

Summary

• ID
  rs214385788
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129842085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGAGAGA GAGAGAGGGA
  GGGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAAAGC ATAAAGTTGG
  CTGGATAGGG AGGTTGGGAT GATTTGTGAG GAATTGGCAA TGGAAAATAT ATTATCAAAA
  TATTTTGAAT AAAATGTTTT TAAATAAAAT TATCTCATTT TAAAAATTAT TTGCCTTGGG
  M
  TGGTCAGATG GCTCAGCAGT TAAGAGCAGT GGCTGTTCTT TCAGAGGTCC TGTGTTCAAA
  TCCCAGCTAC CACATGGTGA TCCACAACCG TCTATAGGAG GATCTGATGC CCTCTTCAGA
  CAAGCAGATA TACATGCATC AGAACATTCA GATATTAAAT AAATTAAAAT CTTTTAAAAA
  TTATTTGCCT CATTTATTGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323543568	CHEV_10_129443272	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214385788					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129842085 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	66 bp downstream
Tssr96487	transcription start site region 96487	1855 bp downstream