rs214448545 SNP Detail

Summary

• ID
  rs214448545
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43059833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gctccccca cacacttatg tgcacaTGTG
  TGCATCCATA CACACATGGC ATGTCCACCA CATACATTCA AAATCAAGCG GAGGAGGGCA
  CACCATCCCG GGTGTGCCTG TACCCTGAGA GGCGATGGTT GCTTCATTTC TGGTTGGTCT
  M
  GTGCCTTCTC TGGGATAGTG GTGCTTTTCT TTCCCTGAGG GACTTCTCAT GAGGAACAAA
  GCATTCCCCT CTGAAGTTGG CTCACAAATC TTCTCCCAGA TGCCCCCAGA TCTCTTGCTA
  TCAGCATTTT CCATGACAAT GTATCAGGTA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322196847	CHEV_7_50665779	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214448545					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43059833 () rs orientation: forward

Symbol	Name	Function Class
Rr645954	regulatory region 645954	1835 bp distal
Siglecg	sialic acid binding Ig-like lectin G	within coordinates
Tssr65989	transcription start site region 65989	1891 bp downstream
Tssr65990	transcription start site region 65990	1870 bp downstream
Tssr65991	transcription start site region 65991	1147 bp downstream
Tssr65992	transcription start site region 65992	1136 bp downstream
Tssr65993	transcription start site region 65993	1108 bp downstream
Tssr65994	transcription start site region 65994	989 bp downstream