rs214490906 SNP Detail

Summary

• ID
  rs214490906
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122067719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTA CTGCACGGGG GTGGGGGGTG
  R
  GGGGGATGGA AAGCAGAGTA AATGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320909960	CHEV_3_121976988	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214490906					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122067719 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13766	CpG island 13766	within coordinates
Dnttip2	deoxynucleotidyltransferase, terminal, interacting protein 2	326 bp upstream
Gm17494	predicted gene, 17494	within coordinates
Rr584273	regulatory region 584273	within coordinates
Rr584274	regulatory region 584274	329 bp proximal
Tssr31491	transcription start site region 31491	301 bp upstream
Tssr31492	transcription start site region 31492	1483 bp upstream