rs214525320 SNP Detail

Summary

• ID
  rs214525320
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30259527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACATCCTTC ACAGGAAGAT CATTCTGGAG ACGGACTGGA
  TCCTTTCTGA CAGAGAGCTC GCTAGGTGTA TTTCTCAGCT AACTCTCTTT CATTTAAATA
  Y
  TAAAAGCGCT GGGTACTCAT CCACATAGTG AGGACGCTTT AACGAGCAAA ACAGGCAAAA
  ATCCTTGCTG AGAATGTGTC TTATCGTGTA GAGGATAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322135270	CHEV_7_31345121	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214525320					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30259527 () rs orientation: forward

Symbol	Name	Function Class
Lin37	lin-37 DREAM MuvB core complex component	264 bp upstream
Psenen	presenilin enhancer gamma secretase subunit	1763 bp downstream
Rr400243	regulatory region 400243	206 bp downstream
Tssr71791	transcription start site region 71791	1355 bp upstream
Tssr71792	transcription start site region 71792	1317 bp upstream
Tssr71793	transcription start site region 71793	571 bp upstream
Tssr71794	transcription start site region 71794	450 bp upstream
Tssr71795	transcription start site region 71795	260 bp upstream