rs214541330 SNP Detail

Summary

• ID
  rs214541330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4299137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGAACAG GAGGCAGGGC
  CCCGGGCTGC AGAGCCATCC ACTCCCTCAG AGAGTGGCCC CACACCTGCC AGTGCTGAGC
  AGAATGAGTA GCTGGGTAGG GGCAGGTGGG TGATCTCTAA ACTGCAAAAC TGTGCTGTTC
  TTGTGAGGTC ACTGCCTGCA CCTTGTGCCC TGGCTGTCTT CCTGTGCCCA TAAAGGAAGT
  R
  GCTTGTTGCC CCCTCCCAGA CATGCTCCCT TTTCGCCCTC CTGTGGATTC TCCCATTAGC
  CATTTGGTCT CACTCTTAAG GCCAGTTGAA GATGGTCCCT TACGGTTTCT CAAATTAGGT
  TAGTGATGTG AAATGCTCCT GTCCCTACCT CCTTCCCGAG CCCCATCCCT GCAGAAGGCA
  ACTGCTGGGT TTCCAATTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324213505	CHEV_13_4248384	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214541330					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4299137 () rs orientation: forward

Symbol	Name	Function Class
Akr1c19	aldo-keto reductase family 1, member C19	777 bp downstream
Gm61344	predicted gene, 61344	within coordinates
Marcksl1-ps4	MARCKS-like 1, pseudogene 4	113 bp downstream
Rr283540	regulatory region 283540	337 bp distal
Tssr118223	transcription start site region 118223	567 bp upstream