rs214581343 SNP Detail

Summary

• ID
  rs214581343
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46855105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGAAGGGG GCTGGGCTCC AGCTCAAAAG
  CCAAGTACCT GATTAGGATG TGTGAGGCCT GGCACtgtgt gtgtgtgtgt gtgtgtgtgt
  gtgtAagctg gtctttgcta ctttgtgggt tcttcttttt cctacccttt atccagagac
  M
  cccccccccc gctctcaccc cctaacacta actaggtagg agaaaaccaa ggatagacag
  gaaagagatc ctagagtctg atttctttcc ttttgtttct ttttttacct cgggctacta
  acaaaccaca accaaccttc ttaatggcca                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325404786	CHEV_17_46681128	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214581343					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46855105 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9232	CpG island 9232	1778 bp proximal
Cul9	cullin 9	within coordinates
Rr527757	regulatory region 527757	1536 bp proximal