rs214685861 SNP Detail

Summary

• ID
  rs214685861
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185317903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATGAGTT TGAGACCTAG
  GTCAGTTTTA CTATCAGTCT ACCCCTCTTT CTGGGCCTTC TGGGGCTGTG CATCCCTTAG
  AGACAGGAAA AGCTCAGGGT ATTCATATCG CTCTTTCCTG CTTCCCTTTC TTTTTCCAGT
  TAGTCAGCTT TCAGTGTTTA GAATGAGGGC GGGGAGGTGC TTGGAATCCC TTTGTTCTTT
  Y
  TTTCCCTGCT CACTAGACCA AGGTCACTCC AAACCAAAGA TCTCTGGACT AGAATTTATT
  AGCTTACGGA AACCCTGTCT TCCTTATCAC CTCCCATGAC ACCTCCCATG TCATTGTGCC
  AAAATGACAT GTCTGAATCC ACATGGATTC GCTGTGTGGA GGATTTTCTT CAGGTTCCTG
  ACTGCATGGC CCACAGCTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320177533	CHEV_1_187409585	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214685861					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185317903 () rs orientation: forward

Symbol	Name	Function Class
Rr425414	regulatory region 425414	317 bp distal
Rr425415	regulatory region 425415	1940 bp proximal