rs214697668 SNP Detail

Summary

• ID
  rs214697668
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:95239845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TATACTGAC TACAGCAGAC CTGTGGGCAA
  ATGACAGTGT ATCTGCACAA ATTATAGCAC AACACCTATT GAGAATGAAG AACTATGTTT
  GTATCAACCA GAGATCTCTT GTTGGCCAAG AGGTTGTTAT GGAGGCTTTT TTGACCCCTC
  K
  GGAAAATACT ATAGAGTCAA TTACATTATA ATTAAAAGAT GCATTGATTA TCTGCTAGCA
  GGGCAATAGT CTTAAAGCCC AAGCTCATGC ATGTTGTGAG GAGTGGTATG GGGAAAGGCT
  TTTTAAAGAC AAAACCACAA GATCTTCAAT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319848291	CHEV_1_97208697	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214697668					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:95239845 () rs orientation: forward

Symbol	Name	Function Class
Cpgi614	CpG island 614	1308 bp proximal
Fam174a	family with sequence similarity 174, member A	1508 bp upstream
Rr396183	regulatory region 396183	1241 bp upstream
Rr416130	regulatory region 416130	1013 bp proximal
Tssr8214	transcription start site region 8214	1487 bp upstream
Tssr8215	transcription start site region 8215	1558 bp upstream
Tssr8216	transcription start site region 8216	1967 bp upstream
Tssr8217	transcription start site region 8217	1986 bp upstream
Tssr13058	transcription start site region 13058	1935 bp downstream