rs214725583 SNP Detail

Summary

• ID
  rs214725583
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97022141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACATATGTC CTAGGATGAT
  GCTGTCCCTA GGTCCCTAGA TCCCTAGGTC CCTGACAGCA AGCTGGTAGA GATTCCTGGT
  TGCTAACATC TTGGCTCAAC TGGAGCCTGG GAGGGCAGTA GGGCCCTTCA GTTCTGATGA
  GTGAGAACAG TGACAGGAGC TGGGGCTGGG CTAATCATGG ACAAGAGGCT TCCTGGAGAA
  Y
  GTGGTTGGCA ATCATGGAGT CTGTTTTATT TGCATAATTC CTCACCAGAG ACAGAACTAT
  GCAACCAAAT TAAACTTTGG CTTCTTTCTT CCTTTTTGAT GGGGGTCTTC TCTTGTAGCA
  TAGGCTAGCC CCTAACTCAA AATCCTTCTG CCTTAGCCTC CTTAATAGCT GGGATTAGGG
  GTATGTGCTA ATAATGTCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116058	CHEV_9_97040507	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214725583					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97022141 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	995 bp upstream
Rr685156	regulatory region 685156	184 bp proximal
Tssr86631	transcription start site region 86631	1025 bp upstream