rs214751010 SNP Detail

Summary

• ID
  rs214751010
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:62173077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTAGGCAG AATAGCTCCT
  GAGTTTATAG GACTTTCCAT GCTTGGACAT AGCCAAGAAA ACCATCTTTC AGGTTGGATA
  ATACTAAGAA GAAGAAAAAA ATCAAGCATC AAAATGAGAA AAATGGTGGA AAAATACAAC
  TTAAAGCATA GTATTTTCCT TAAAACATTT ATATATATAC ACATGCATAT ATATATATAT
  W
  TATATATATA TTTAAGTCAA GATAAGTTGC AAGATAAGAT GCTGGAAGAT ACCCAGTGAG
  TGAAATGTTG AAGTCAGGTA ATGTTGAGTA ACAGTACTGG GGGTAGGTAA TCCTAGTGGA
  AAGTAATTAC TAACTCAAGG TAGAATAAAA TGAGAGGTAA GAATCCAATG AAGAAAGCAA
  CAGTGTTTAA AGAGAGTGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CE/J	I/LnJ	LEWES/EiJ	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	ST/bJ	WSB/EiJ
ss354198760	MGP_WTSI_2_62180790	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CE/J	I/LnJ	LEWES/EiJ	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	ST/bJ	WSB/EiJ
rs214751010					SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss354198760	MGP_WTSI_2_62180790	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:62173077 () rs orientation: forward

Symbol	Name	Function Class
Dpp4	dipeptidylpeptidase 4	Intron
Rr557853	regulatory region 557853	438 bp distal
Tssr507	transcription start site region 507	789 bp downstream
Tssr24253	transcription start site region 24253	900 bp downstream
Tssr24254	transcription start site region 24254	924 bp downstream
Tssr24255	transcription start site region 24255	937 bp downstream
Tssr24256	transcription start site region 24256	995 bp downstream
Tssr24257	transcription start site region 24257	1084 bp downstream
Tssr24258	transcription start site region 24258	1234 bp downstream