rs214776759 SNP Detail

Summary

• ID
  rs214776759
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115476713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGGGCAAAA GGTCAAAGGG GGTCAGATCT
  CGATCTGAGC GCACTGGTGT GCGTGATCAG CTGTGTTTCC TCATTATAAT CAGGAAATCC
  TGTCTCCCTT CAGTGGAGGC ACATCTGGAG AGTCAGCAAG GGTggggaag ggcagggggg
  R
  agggaggaaa aggggaagag ggtggggtca ggtagcaagg aagggagagg CTCATCTCTC
  CTTTCTGGGC TCAAAATAAG CCTTCATTTC TTTAGTTCTT ATACATGTAC CTCTGCTCTC
  TGCTACACTT CTTTCCCCAT TAGCCTCTGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320892814	CHEV_3_115385982	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214776759					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115476713 () rs orientation: forward

Symbol	Name	Function Class
Gm64341	predicted gene, 64341	941 bp downstream
Rr397954	regulatory region 397954	1596 bp downstream
Rr583574	regulatory region 583574	1533 bp distal
Rr583575	regulatory region 583575	within coordinates
Tssr31331	transcription start site region 31331	79 bp upstream
Tssr35267	transcription start site region 35267	371 bp upstream