rs214818535 SNP Detail

Summary

• ID
  rs214818535
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:109759634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCACCCGT GCAAATATAG CTGCATGTGC
  AGTAGGTCTC TCTTGATACA TTATGAGGTG CAAGCATTAA CTGCTGAAAA ATCATTTGAC
  AGCTTGTTTG ATTAATTTCA CATAGTCATC CTTCTTACTC TTCTTTTACC TGTCAGATAC
  R
  TGGATTAAAC CCTGTAATAG GAACTTAATT GAGCAGAATA ATTCAAGAAA GCATTACACT
  GTTCATATTG ATCATGGATT CACCAATGAT TCAGCTTCTC GTTGATTCAC ATTTCAGAGT
  TTGGCCTGAT GTGGTAGAAA TGTGGACATT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320870670	CHEV_3_109655236	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214818535					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109759634 () rs orientation: forward

Symbol	Name	Function Class
Ntng1	netrin G1	within coordinates
Rr65057	regulatory region 65057	767 bp proximal