rs214843370 SNP Detail

Summary

• ID
  rs214843370
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142208842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTG CAGTACCCAT GAGCAGTAGT
  W
  GTTTCCAGAG CAGTTCACAG GCAGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471548	CHEV_7_149841010	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214843370					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142208842 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19966	CpG island 19966	655 bp distal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Mir483	microRNA 483	109 bp upstream
Rr167001	regulatory region 167001	within coordinates
Tssr2463	transcription start site region 2463	1252 bp upstream
Tssr70230	transcription start site region 70230	1995 bp downstream
Tssr70231	transcription start site region 70231	1540 bp downstream
Tssr70232	transcription start site region 70232	1487 bp downstream
Tssr70233	transcription start site region 70233	1444 bp downstream
Tssr70234	transcription start site region 70234	1406 bp downstream
Tssr70235	transcription start site region 70235	1383 bp downstream
Tssr70236	transcription start site region 70236	1361 bp downstream
Tssr70237	transcription start site region 70237	1260 bp downstream
Tssr70238	transcription start site region 70238	1230 bp downstream
Tssr70239	transcription start site region 70239	1100 bp downstream
Tssr70240	transcription start site region 70240	752 bp downstream
Tssr75866	transcription start site region 75866	1957 bp upstream
Tssr75867	transcription start site region 75867	1924 bp upstream
Tssr75868	transcription start site region 75868	1905 bp upstream
Tssr75869	transcription start site region 75869	1883 bp upstream
Tssr75870	transcription start site region 75870	1870 bp upstream
Tssr75871	transcription start site region 75871	1826 bp upstream
Tssr75872	transcription start site region 75872	1418 bp upstream
Tssr75873	transcription start site region 75873	1406 bp upstream
Tssr75874	transcription start site region 75874	1196 bp upstream
Tssr75875	transcription start site region 75875	1159 bp upstream
Tssr75876	transcription start site region 75876	1111 bp upstream
Tssr75877	transcription start site region 75877	1052 bp upstream
Tssr75878	transcription start site region 75878	770 bp upstream
Tssr75879	transcription start site region 75879	729 bp upstream
Tssr75880	transcription start site region 75880	698 bp upstream
Tssr75881	transcription start site region 75881	579 bp downstream
Tssr75882	transcription start site region 75882	620 bp downstream
Tssr75883	transcription start site region 75883	931 bp downstream
Tssr75884	transcription start site region 75884	969 bp downstream
Tssr75885	transcription start site region 75885	1016 bp downstream
Tssr75886	transcription start site region 75886	1074 bp downstream