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rs214855797 SNP Detail
Summary
  • ID
    rs214855797
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr7:33874855 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          TTATCCCCCT CCTAGACTTA TACCATTTGC ATGCATGTAT
    AGAATTTCTT TTTTTTCAAG ACAGGATTTC TCTATGTAAT CCCGGCCGTC CTGGAACTCA
    Y
    TCTGTAGACC ACGCTAGCCT CGAACTCAGA AATCCCCCTA CCTCTGCCTC CTGAGTGCTG
    GGATTCTAAA CTGTTTTTAA AAGAGGGTTC TCGCCAGGC                       
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss322148795 CHEV_7_34960449 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs214855797 SNP C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:33874855 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm12778 predicted gene 12778 282 bp upstream
Gm12783 predicted gene 12783 1328 bp upstream
Rr170512 regulatory region 170512 1855 bp distal
Rr380644 regulatory region 380644 257 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory