rs214905775 SNP Detail

Summary

• ID
  rs214905775
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36073281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGGACCAG GTTAGGTGTC TGCAGAGTCT
  TGTGCTTGGG TGACTCATTA AGATTGAGCT GGGACCTTGT ACCCATCTCT GGTCTGGCAT
  CATGGATAGT AGCTGAGTCC CTTGAAATGT CTCTCTTCAT CTGCTTTGCA TGACAGGGTG
  K
  TAGACAGCCA AACCTGAGAA CCTATGACAT GTTCTTGGAT CAGCAATAAA GATGGGGAGg
  gggctggaga gatggctcag cggttaagag cagtgactgt tcttccagag gtcctgagtt
  caaatcccag taaccacatg gtgactcaca                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325584113	CHEV_18_36099882	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214905775					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36073281 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9857	CpG island 9857	1393 bp distal
Cpgi9858	CpG island 9858	252 bp distal
Gm56493	predicted gene, 56493	within coordinates
Rr536027	regulatory region 536027	863 bp distal
Rr536028	regulatory region 536028	571 bp distal
Rr536029	regulatory region 536029	350 bp distal
Rr536030	regulatory region 536030	168 bp proximal
Rr536031	regulatory region 536031	1680 bp proximal
Rr536032	regulatory region 536032	1709 bp proximal