rs214919485 SNP Detail

Summary

• ID
  rs214919485
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79134613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCAAGAA GCATATGGAA
  AACACACAGC CTAAAATCAC AATGTCAACA TCTAGCTTGT TGTTATGATT TAAAACAAAA
  AAAAAAAAAA CAAAAACAAA ACTAAGCTAC TTTGTTTTAA ACTTCTAACA TTCACAACTA
  TCATCTTAAC ATACTTCTTG GCAAAATAAA ATGTGTTTTA TCTAGCCACC CCCACCCCCA
  T
  CCCCATCAAT CCAGAGTGTT GCCATCATTA TACGTATTGA GTTCAGCCAG GTTCATACTC
  AATGCTGCTA AACTCTTAAA AATACATTAA CTCAGAGCTA GTAAACTGAC AGTTCACTAA
  AAGTACAACC TTCAACAGTC ACTACTTAAG CTGTCAATAG GCACGCTGTC AAACCATGTG
  AAGCTTCATC TATAATCCAC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759391	CHEV_11_79057289	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214919485					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79134613 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm103	DNA segment, Chr 11, Boehm 103	1273 bp proximal
Gm30470	predicted gene, 30470	within coordinates
Tssr3595	transcription start site region 3595	666 bp downstream
Tssr109469	transcription start site region 109469	1286 bp upstream
Tssr109470	transcription start site region 109470	442 bp upstream
Tssr109471	transcription start site region 109471	357 bp upstream
Tssr109472	transcription start site region 109472	319 bp upstream
Wsb1	WD repeat and SOCS box-containing 1	within coordinates