rs214934756 SNP Detail

Summary

• ID
  rs214934756
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119898525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCGAGCT TTCTTTTTAA
  TTATGTATAT GTGCCCAGGG AGGCTAGAGA ACTCAGATCT CCCTGTGGCA GTCGTGAGTT
  GCCCATCACT ATAGGTGCTG GGAGTCGAAC TTGTGTCCTC TGCAAGAGCA GTGTGTGCTC
  TTAGCCACCG AGCCATTTCT TCAGCCCCCT GGCTTTGTTT TTGTTTGTTT TGTTGTTGAG
  R
  TAGGTCCCAC ACATCCTGGG CTGGACTTTA AATAGCTATG GGGTTAAAAA GACCTTGAGC
  CTTTCATCCT CCTGCCTCCA CTGCCCAAGT CTGGGATGCT CCACCGTTTA TGAGGGGCTG
  GGGATGGAAC TCAGGCTAGT CTAACATTTT GCCATCTGAG CTGTATCCCC AGGGCATTCA
  AGCTCTTCCT CGTGTTCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323224496	CHEV_9_119978577	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214934756					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119898525 () rs orientation: forward

Symbol	Name	Function Class
Cx3cr1	C-X3-C motif chemokine receptor 1	1163 bp upstream
Gm33858	predicted gene, 33858	within coordinates
Rr688628	regulatory region 688628	1202 bp proximal
Tssr92011	transcription start site region 92011	1168 bp upstream
Tssr92012	transcription start site region 92012	1158 bp upstream