rs214938463 SNP Detail

Summary

• ID
  rs214938463
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110366862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGTCGTA TTTTTAAATT
  ATTGCTTCAT TTTTATCACA TCTTTAACAT TTTAAGTGTG CTATGTAATG TATATTAGCA
  GTCATGTGAG TATCATTGAT AAATATGTAG ATTGCAAGCA TCAGGCTATG AAGTAGAAAG
  AATAAAATTT GGTGCTTAAA TGAGACAGCT GTGAAGTGAA TGAAAACTCA CAGTAGCAGT
  R
  ACTCTGTGAA AGAGGCACAA GTCAAAAGGT GGCTCCCCAG TGTGGCTTAA AGTGGGGGTG
  CTTGGGTGAG GTCACTGGTC AAGACTAAAA CCACCAGCAG GCAATTAGGA GTTGGGCCTA
  GGAATCTCTG GTTGAGATGC ACCTGCCGCT CTAGAGTATT CTGGGCCTAA GAGTTTACTA
  GCTTATCAGC AGGCAGGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322398773	CHEV_7_117911169	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214938463					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110366862 () rs orientation: forward

Symbol	Name	Function Class
Ampd3	adenosine monophosphate deaminase 3	551 bp upstream
B430319F04Rik	RIKEN cDNA B430319F04 gene	within coordinates
Cpgi19579	CpG island 19579	428 bp proximal
Rr653308	regulatory region 653308	138 bp proximal
Rr653309	regulatory region 653309	766 bp proximal
Rr653310	regulatory region 653310	1267 bp proximal
Tssr68503	transcription start site region 68503	408 bp upstream
Tssr68504	transcription start site region 68504	451 bp upstream
Tssr68505	transcription start site region 68505	483 bp upstream
Tssr68506	transcription start site region 68506	514 bp upstream
Tssr68507	transcription start site region 68507	960 bp upstream
Tssr68508	transcription start site region 68508	1175 bp upstream
Tssr74265	transcription start site region 74265	1646 bp downstream