rs214986396 SNP Detail

Summary

• ID
  rs214986396
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34484967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTGATCCC ATAAAATCAT
  CTCTTTAGGC ACTTCCTATT CTTACCCTTT GTTCTGATTC CCTATGTTAG TGTTTAGTAG
  ATTGAGAGCA TCCAATGAGA GCCCATTTCT CACCCTCTGT ATCTGTAAAA TCTAAGGAGA
  ATGTGAGTGT AATGATGGGG CAAGCCCAGC CTGTGAGGAA GGCCAGCACA TGTCCTCCCT
  M
  GTTTAAGACC ATATGAGCTG TACTATTTCT CTTGCAGTCC TTCACTTCAT ACATCGGATG
  AGATTATTTC GGTATTTGAA GAGATAAAAA CAGCCCAAGC TTCACAGAAG AAATGCAAAG
  GAATTAGTCC TACTCACCAT TAACAAAAGA GCTAGGTGTA GACAGAGCAG GAGGCAAGGT
  GGACGAGGGG AAGTTGTAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701731	CHEV_3_34329740	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214986396					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34484967 () rs orientation: forward

Symbol	Name	Function Class
Gm20515	predicted gene 20515	within coordinates
Rr575127	regulatory region 575127	1845 bp proximal