rs215039246 SNP Detail

Summary

• ID
  rs215039246
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90879592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAACTGCA GGCTATAAGC AAAGACGCCA
  TCTCAAGGAG GGGTCTGGGG GCGTCCTTTG CCTCCTTGTT GGCCTATAAA AGATAAGCAG
  GCAGGCAGAC CTCACCTCAC GCCCAGGCAG CCTTATCGCC ACACTCAAGG GACAGAGAGA
  R
  GGTGAGTAAC TTGGCAGTGC TGGAGAGGGC TGGGTGTTGC TGTGACTTCC AGCTTCTCCA
  CAAGTGTTTT CTCTGCCAGG CTTACTGGGC AGCCAAGTGC GGGCACCAAG CAGGACAAGC
  AGAGAGAACT ACCTGTGGTC TGTGGTCTAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319838421	CHEV_1_92848447	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215039246					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90879592 () rs orientation: forward

Symbol	Name	Function Class
Mlph	melanophilin	728 bp downstream
Prlh	prolactin releasing hormone	1238 bp upstream
Rr415503	regulatory region 415503	within coordinates