rs215101109 SNP Detail

Summary

• ID
  rs215101109
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39370811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGTGCTCA GGACAGGTGT GGCACAAAAA
  CAGAAACTGT GTTTTTTCTG TGATTCACCC TTCCCAATGT ACTAGAGAGC CAAGAATCAT
  TCCAGTGTCC TTAGCTAAAT TAGGCAAAAA AAAAAAAAAA ACACACAAAA GGAACCCAAA
  Y
  ACACCAATAC TGAAGGAAAA AGTTATGTTT TAATGCTGAA AAGCAAAGAA AACTGGGTTT
  AAATTTCACA GAttgtgttt tattaaaaga aagagaagcc agagatgttt tgtggagtgc
  agtatgtgtg aaggaaggga gtgcctctgc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228539	CHEV_2_39336319	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215101109					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39370811 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	787 bp proximal
Rr373076	regulatory region 373076	813 bp downstream