rs215140472 SNP Detail

Summary

• ID
  rs215140472
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102560686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTTATCC ATCTGTATAC
  AAGCTAGAGC AGACCACACT CACATGGTCA TTTCTGCTCC TGTTTGAGAA ATGGGTGACG
  GACTTAGTCT CTTTTTAAAG TGATCACATA TATGCATGGG CTCTCGAATT GTTTACCCCA
  CAAAAATGGT ATCAGGTTCT GACCCTGCTA TCCTAAATTT TGCTTTATTC ATTCCAAAAT
  W
  CTTCTGAGAA GCCCGGCACT TGTTTCTGAG AAAATACAGC ACAATCAATA TGAATACATG
  CTGTGCACTT AGATGGGGCA GATCTACCGC TACACTACCA TCTTCTCCAT CTATGAGACC
  CCTTAGAACT TGTAGCTTCT AAATCCACTA CTATTCCTGT TCTTGTTTAG CATTCATTTG
  CTTTTGTGCA TTTGTGTGTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323158843	CHEV_9_102585817	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215140472					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102560686 () rs orientation: forward

Symbol	Name	Function Class
Gm46150	predicted gene, 46150	within coordinates
Rr207053	regulatory region 207053	1286 bp distal