rs215189948 SNP Detail

Summary

• ID
  rs215189948
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127683813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTAAAAGG AAAACAAAAC
  AAAACAAACC TTGTCTCAAA CAACAACAAC AACAACCCAA CAAGTTGGTA AGGTTTTTTC
  CCTTAGAGAA TTATAAAACA ATTAATCTTA GAGAATATTT ACTAAAATGA AATTCTATGA
  TGCTACTAGT TGAGGCAAAT AAAATTGAAC CAGAGGGAAA GGTGAAGAAG AGAGCATGAA
  K
  TAGAGATAGG GAGCTAATAC TTACTGAAGG CCTACTGTGT GCTGGGCATT CTGTGTAAAG
  TATATCTCAG TTAAGAGGTG GACAGCACTA CACCTATTAC AAATGAGGAA ACTGGTCATC
  AGGCTCAGGT TGATCAAGCA GTAATGCCAG GCTTTAAATT TAGAATGACC ACACTATAAG
  TCCTGTGCTG CTTCTTAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320957929	CHEV_3_127593082	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215189948					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127683813 () rs orientation: forward

Symbol	Name	Function Class
Fam241a	family with sequence similarity 241, member A	Intron
Rr584892	regulatory region 584892	240 bp distal
Rr584893	regulatory region 584893	within coordinates
Rr584894	regulatory region 584894	632 bp proximal