rs215197607 SNP Detail

Summary

• ID
  rs215197607
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:25780096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGTACAT ATAGATTGTG
  GAATCCAAGA TGGATATTCA ATACTTCATC ATGAAGACAA CAGACCTAAC TTATGGACAT
  CCAAATGGAC AGACTGCTAT GAATAGTCTT TTTTTTTCTA TGCTTTGGTC CAAGCACAAA
  TTCCTTGGGT TTTTAAGATT TAGTTTTGTT GACATTTTGA TCTTCTGTAT CTGGTGCTAT
  R
  CTGAATTTGT AAGAAGTCAT CTCTAAACTC AACAAAGAAA AGTTTAACAA GACAGTTCTT
  CTTAGAAGGG TTTCCGTGGC TAATCTCCTA GATATACATT GATTTCTATG GTAGAGAGAT
  GTAGGCATTA GGTAACACCA GAAAACTGTG CAGTTTCTAA GACTGTGATT CCAGAAGTAT
  ATTTCCAGTG TATGATTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324304531	CHEV_13_25687982	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215197607					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:25780096 () rs orientation: forward

Symbol	Name	Function Class
Rr275391	regulatory region 275391	696 bp distal
Rr275392	regulatory region 275392	1105 bp proximal