rs215228758 SNP Detail

Summary

• ID
  rs215228758
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88903449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTGAGGC TGCTGGTCAC
  ATGGTTTCTG AAGTCCAAAG TGCAAGGAGT GTTAGCACAT TAGTGCTCAG CTCGCTTTCT
  CCACTTTATA CAATTCAGCA TTCCAGCCAA GGACTAGAGC ATCCAGAGTG GACAGCTCCT
  CCCACCTCAA CCAATGGAAT CTTGAGGACC CCCCCCCCCC TGCCAAGATG TGCTTTAACC
  Y
  GACCCATCAC ATTGGGTTTT CCTCTCACCA TATGAAAATC ATTAAACCGT TACAATTTTC
  TACCAGGTTC CCTTAAAACC TTTAAAGAGA AAACACATTT ATTTATTCAG TATGGATACG
  TGTATGTATA TGTGCATGTG TGTGGACATA TGCACTCTGA TGTAGAGGCT AAGGTCAGAG
  GACAACTTAT GGAAGTCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323783782	CHEV_11_88873937	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215228758					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88903449 () rs orientation: forward

Symbol	Name	Function Class
Trim25	tripartite motif-containing 25	within coordinates
Tssr104066	transcription start site region 104066	1714 bp downstream
Tssr104067	transcription start site region 104067	1646 bp downstream