rs215250614 SNP Detail

Summary

• ID
  rs215250614
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83535951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTCTTCCT GTCACTGCTG
  GATGGGTAGG GGGTTGGGAG GTTTTTTTTG AGGGGGGAGG TACTGTGCCC AGCACCATCC
  ACCTTCAGAA AAGTTTCATC TTCCCTGACA CACTACCTGT GAAATAACAT CTCTCCATTC
  TCTCTTCTAG TCTCTGGCCA TTACCAACTT CATCCGTGAA CTTGATGATT TGAAGCACTC
  Y
  GTTCTTTTGT GTCTGTCTTA TTTCATTAAG CATAATGTCA TTGAGGTTAA TCAGTGCGAT
  AACGTATCAG AATGTCCTTT TTATAGGAAA TAATATTCAC TTGTATGAAC TTTAGACATT
  CATGGTATAC CCCCAGAATT TGTGGACAAG CAACCAAGCT GTCTGTGGTA TACAGTGCCA
  CCCAGTGGTT GGTAAGGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322294680	CHEV_7_91035253	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215250614					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83535951 () rs orientation: forward

Symbol	Name	Function Class
2310034P14Rik	RIKEN cDNA 2310034P14 gene	1550 bp downstream
Cpgi19376	CpG island 19376	1922 bp distal
Mesd	mesoderm development LRP chaperone	within coordinates
Rr158447	regulatory region 158447	within coordinates
Rr168144	regulatory region 168144	350 bp distal