rs215253548 SNP Detail

Summary

• ID
  rs215253548
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:108507531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACTCTCT GTCTGTCTCT
  GTCTCTGCTC CCCCCCCCCC CACCAAAGCC AAAAATCAAA AGAAACTAAG AAAAAGTTAA
  AAATAAGCAA ATCACAAAGA GCCCTGGGTG TGTTTTGTGT TGGTGGATTA CTCCTGGGAA
  TAGCCTTGCC CTGGGGTGTG TCACTCCATT GAAGAAAACT GCTATTGCCT TTCCCAGCAT
  R
  TATCAATTGC AAATAGCTTC TTGTTAGGGG CTAGACTTCC GACTTTTTCT TATTGTTAGG
  AAATGTTTTC TGGTGTAAAC CTGTTCCGGT GTCTTGTTCG ATTTTTAAAG AGATTTTTTT
  TTTTAAGTAT TTTGGTACAC ACTTCTAATC CCAACACTTG AGAGGCTAAA ACAGGTTAAA
  CATAAATTCA AGGATGTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320454332	CHEV_2_108517343	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215253548					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:108507531 () rs orientation: forward

Symbol	Name	Function Class
Rr373660	regulatory region 373660	within coordinates