rs215415379 SNP Detail

Summary

• ID
  rs215415379
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142618108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAG CCCTGGTGGG AGGCCTTCCC
  Y
  GGACCAGACG TGTTTAGTGA GGCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322473961	CHEV_7_150250276	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215415379					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142618108 () rs orientation: forward

Symbol	Name	Function Class
Cd81	CD81 antigen	within coordinates
Rr366644	regulatory region 366644	614 bp downstream
Tssr70273	transcription start site region 70273	577 bp upstream
Tssr70274	transcription start site region 70274	598 bp upstream
Tssr70275	transcription start site region 70275	1383 bp upstream
Tssr70276	transcription start site region 70276	1413 bp upstream
Tssr70277	transcription start site region 70277	1562 bp upstream