rs215438093 SNP Detail

Summary

• ID
  rs215438093
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:60176515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cagcccatc ggccgagttg acgtcacggg
  gaaggcagag cacatggagt ggagaaccac cctcggcaca tgcgcagatt atttgtttac
  cacttagaac acagctgtca gcgccatctt gtaacggcga atgtgggcgc ggctcccaac
  M
  CCTTAGGTAT GAAGGACTAA GTATTTAATA GGAGAACAGC GAATGAACCA ACGCATGCTG
  AGGTAGGGCA GGGACACTGC CTTTCCTCTT GGTAAGAAGC AACTTGTGAA TCTTCACAAA
  AATTCAAAAA TTTAGAACAG GATGGAGTAG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324360194	CHEV_13_60130062	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215438093					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:60176515 () rs orientation: forward

Symbol	Name	Function Class
A530065N20Rik	RIKEN cDNA A530046M15 gene	1010 bp upstream
Rr284562	regulatory region 284562	687 bp proximal
Tssr120109	transcription start site region 120109	921 bp upstream
Tssr120110	transcription start site region 120110	972 bp upstream
Tssr120111	transcription start site region 120111	1003 bp upstream