rs215467152 SNP Detail

Summary

• ID
  rs215467152
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103225713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCATACTG TCCATGTGTC
  TAGGTCATGG TGCATGTTAG CTAGCTCATC CCTTATTATA GAACGTTCTG TCTGAACAGA
  GCCCCTGGGT GACTTCCCTT CAATGTGAAG TAGTGTAACT GCTGGGCTAA GTATACATTT
  AGTTTATGTG GTCTGGATAG CTTTAAACTT GCAGGGCTTC CTACTTCTGT CTCCTAGTAC
  K
  AGAATTGCAT GGTATTCACT ATCAGACTCT TCCTAGAAGA GATTTGGTGT CACTTTATAG
  TCACTTGACT TTTAGCATCT GGTATGGCTA CAGTGGAGGT AGTAGCATCA TGCTTTAAAA
  GAATCAGTCT TTACCTCTCT TACTCTGCCT CTCTTTGCCT CCCATCCTTG TCCTGCTAAT
  TGCTGTTATT ACCAGCATGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160941	CHEV_9_103250844	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215467152					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103225713 () rs orientation: forward

Symbol	Name	Function Class
Rr202394	regulatory region 202394	431 bp proximal
Rr207098	regulatory region 207098	514 bp distal
Topbp1	topoisomerase (DNA) II binding protein 1	within coordinates
Tssr91191	transcription start site region 91191	790 bp upstream