rs215500147 SNP Detail

Summary

• ID
  rs215500147
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36077340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGTACCAGG TCCACATACA TGAGTGCAGT
  CAGAACACTC ACACAAAAGA AAACAAAACA AACTAATGTA AAAtgtgtgt gtgtgtgcac
  atgtgtgtgt gcatatgtgc gtgtgtaggc ttatgggcac cttgtgaagg gcagttctct
  Y
  cactctcatg agggtcctgg ggactgaact caggtcagca ggcttgcagt gtaggatggc
  aagggccttt acctacagag ccatcttgcc agactcAGAG GAtgatcctc ccgtctgaag
  cttcaccatg ttgggattat aggcagcgtt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325584130	CHEV_18_36103941	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215500147					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36077340 () rs orientation: forward

Symbol	Name	Function Class
Gm56493	predicted gene, 56493	within coordinates
Rr536031	regulatory region 536031	1879 bp distal
Rr536033	regulatory region 536033	1077 bp distal
Tssr150585	transcription start site region 150585	1878 bp downstream