rs215521168 SNP Detail

Summary

• ID
  rs215521168
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:96436161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGGC TCCTGTCCTC ATGCCTCACC
  R
  CCTCCCTCGG AGACACATGG TCACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323821031	CHEV_11_96406649	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215521168					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:96436161 () rs orientation: forward

Symbol	Name	Function Class
Rr238060	regulatory region 238060	1040 bp proximal
Rr252638	regulatory region 252638	1562 bp distal
Rr252639	regulatory region 252639	441 bp proximal
Skap1	src family associated phosphoprotein 1	within coordinates
Tssr104543	transcription start site region 104543	612 bp downstream
Tssr104544	transcription start site region 104544	38 bp upstream
Tssr104545	transcription start site region 104545	91 bp upstream
Tssr104546	transcription start site region 104546	99 bp upstream
Tssr104547	transcription start site region 104547	141 bp upstream
Tssr104548	transcription start site region 104548	235 bp upstream
Tssr104549	transcription start site region 104549	248 bp upstream
Tssr104550	transcription start site region 104550	306 bp upstream
Tssr104551	transcription start site region 104551	334 bp upstream
Tssr104552	transcription start site region 104552	355 bp upstream
Tssr104553	transcription start site region 104553	1692 bp upstream